How to get from San Juan to San Diego

No nonstop flights. The fastest way is via Austin: about 11h 30m including the connection. Other options: via Orlando, Miami, Dallas and Atlanta. Two tickets from $241.

Flights from San Juan to San Diego

Pick a departure date to see flights and seller prices

We search agencies and airlines for your day: nonstop and connecting flights, baggage, departure and arrival times.

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Where to connect

Options with one connection, fastest first

fastest, via Austin
11h 30m
two tickets, via Orlando
$241
connection options
5
straight-line distance
3,296 mi (5,305 km)
fastest
Via Austin
United States
11h 30m
with the connection
San Juan to Austin flight 5h 20m
Connection of about 3h
Austin to San Diego flight 3h 10m
Via Orlando
United States
11h 34m
with the connection
San Juan to Orlando flight 3h 13m
Connection of about 3h
Orlando to San Diego flight 5h 21m
two ticketsfrom $241
Via Miami
United States
11h 40m
with the connection
San Juan to Miami flight 2h 56m
Connection of about 3h Arrival: Fort Lauderdale-Hollywood International, Miami International. Departure to San Diego: Fort Lauderdale-Hollywood International, Miami International.
Miami to San Diego flight 5h 44m
two ticketsfrom $425
Via Dallas
United States
11h 47m
with the connection
San Juan to Dallas flight 5h 32m
Connection of about 3h Arrival: Dallas Love Field, Dallas/Fort Worth International. Departure to San Diego: Dallas Love Field, Dallas/Fort Worth International.
Dallas to San Diego flight 3h 15m
two ticketsfrom $613
Via Atlanta
United States
11h 54m
with the connection
San Juan to Atlanta flight 4h 5m
Connection of about 3h
Atlanta to San Diego flight 4h 49m
two ticketsfrom $1,019

One ticket or two

How the options are calculated and what to keep in mind at the connection

Flight times come from the nonstop schedule (estimated from the distance where there is no schedule), with 3h allowed for the connection. The price of an option is the sum of the lowest known fares for each leg; their dates may not match, so treat it as a guide. The search shows tickets for your dates, including connections on a single ticket.

Nearest nonstop flights

The closest you can get without a connection

Frequently asked questions

Is there a nonstop flight from San Juan to San Diego?
There are no nonstop flights in the schedule. You will need a connection, the fastest is via Austin.
What is the fastest way to fly from San Juan to San Diego?
Via Austin: 5h 20m to the connection, 3h 10m after it, about 11h 30m in total with 3h for the connection.
How much does a flight from San Juan to San Diego with a connection cost?
Two nonstop tickets via Orlando from $241. This is the sum of the lowest known prices for each leg, and their dates may not match.
Which cities can you connect in between San Juan and San Diego?
Austin (11h 30m total), Orlando (11h 34m total), Miami (11h 40m total), Dallas (11h 47m total) and Atlanta (11h 54m total).
How far is San Diego from San Juan?
3,296 mi (5,305 km) in a straight line between the cities.
How much time should I allow for the connection?
The options allow 3h. On a single ticket the carrier is responsible for the connection; on separate tickets you set the margin yourself, allowing time to collect and re-check your bags.