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How to get from San Juan to Houston

No nonstop flights. The fastest way is via Tampa: about 8h 45m including the connection. Other options: via Miami, Orlando, Atlanta and Austin. Two tickets from $87.

Flights from San Juan to Houston

Pick a departure date to see flights and seller prices

We search agencies and airlines for your day: nonstop and connecting flights, baggage, departure and arrival times.

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Best fares from San Juan to Houston

Lowest one-way prices found by recent searches for the next 120 days; press a card to search that date

Cheapest one-way $96 18 November 2026, with a connection Cheapest nonstop $196 18 November 2026, UA Cheapest in the next 7 days $98 16 November, Mon Cheapest month November 2026 tickets from $96

Where to connect

Options with one connection, fastest first

fastest, via Tampa
8h 45m
two tickets, via Miami
$87
connection options
5
straight-line distance
1,997 mi (3,214 km)
fastest
Via Tampa
United States
8h 45m
with the connection
San Juan to Tampa flight 3h 15m
Connection of about 3h
Tampa to Houston flight 2h 30m
two ticketsfrom $385
Via Miami
United States
8h 47m
with the connection
San Juan to Miami flight 2h 56m
Connection of about 3h Arrival: Fort Lauderdale-Hollywood International, Miami International. Departure to Houston: Fort Lauderdale-Hollywood International, Miami International.
Miami to Houston flight 2h 51m
two ticketsfrom $87
Via Orlando
United States
8h 53m
with the connection
San Juan to Orlando flight 3h 13m
Connection of about 3h
Orlando to Houston flight 2h 40m
two ticketsfrom $136
Via Atlanta
United States
9h 25m
with the connection
San Juan to Atlanta flight 4h 5m
Connection of about 3h
Atlanta to Houston flight 2h 20m
two ticketsfrom $144
Via Austin
United States
9h 25m
with the connection
San Juan to Austin flight 5h 20m
Connection of about 3h
Austin to Houston flight 1h 5m

One ticket or two

How the options are calculated and what to keep in mind at the connection

Flight times come from the nonstop schedule (estimated from the distance where there is no schedule), with 3h allowed for the connection. The price of an option is the sum of the lowest known fares for each leg; their dates may not match, so treat it as a guide. The search shows tickets for your dates, including connections on a single ticket.

Nearest nonstop flights

The closest you can get without a connection

Frequently asked questions

Is there a nonstop flight from San Juan to Houston?
There are no nonstop flights in the schedule. You will need a connection, the fastest is via Tampa.
What is the fastest way to fly from San Juan to Houston?
Via Tampa: 3h 15m to the connection, 2h 30m after it, about 8h 45m in total with 3h for the connection.
How much does a flight from San Juan to Houston with a connection cost?
Two nonstop tickets via Miami from $87. This is the sum of the lowest known prices for each leg, and their dates may not match.
Which cities can you connect in between San Juan and Houston?
Tampa (8h 45m total), Miami (8h 47m total), Orlando (8h 53m total), Atlanta (9h 25m total) and Austin (9h 25m total).
How far is Houston from San Juan?
1,997 mi (3,214 km) in a straight line between the cities.
How much time should I allow for the connection?
The options allow 3h. On a single ticket the carrier is responsible for the connection; on separate tickets you set the margin yourself, allowing time to collect and re-check your bags.