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How to get from San Francisco to San Juan

No nonstop flights. The fastest way is via Austin: about 11h including the connection. Other options: via Tampa, Miami, Atlanta and Dallas. Two tickets from $226.

Flights from San Francisco to San Juan

Pick a departure date to see flights and seller prices

We search agencies and airlines for your day: nonstop and connecting flights, baggage, departure and arrival times.

Prices by day: San Francisco to San Juan

Lowest one-way price in dollars from recent searches, cheap days in green. Press a day to see flights and exact prices.

Filters

Best fares from San Francisco to San Juan

Lowest one-way prices found by recent searches for the next 120 days; press a card to search that date

Cheapest one-way $261 17 November 2026, with a connection Cheapest in the next 7 days $261 17 November, Tue Cheapest weekend departure $430 Fri, 20 November 2026 Cheapest month November 2026 tickets from $261

Where to connect

Options with one connection, fastest first

fastest, via Austin
11h
two tickets, via Atlanta
$226
connection options
5
straight-line distance
3,622 mi (5,829 km)
fastest
Via Austin
11h
with the connection
San Francisco to Austin flight 3h 30m
Connection of about 3h
Austin to San Juan flight 4h 30m
Via Tampa
11h 4m
with the connection
San Francisco to Tampa flight 5h 9m
Connection of about 3h
Tampa to San Juan flight 2h 55m
two ticketsfrom $340
Via Miami
11h 8m
with the connection
San Francisco to Miami flight 5h 32m
Connection of about 3h Arrival: Fort Lauderdale-Hollywood International, Miami International. Departure to San Juan: Fort Lauderdale-Hollywood International, Miami International.
Miami to San Juan flight 2h 36m
two ticketsfrom $243
Via Atlanta
11h 10m
with the connection
San Francisco to Atlanta flight 4h 40m
Connection of about 3h
Atlanta to San Juan flight 3h 30m
two ticketsfrom $226
Via Dallas
11h 16m
with the connection
San Francisco to Dallas flight 3h 35m
Connection of about 3h Arrival: Dallas Love Field, Dallas/Fort Worth International. Departure to San Juan: Dallas Love Field, Dallas/Fort Worth International.
Dallas to San Juan flight 4h 41m
two ticketsfrom $680

One ticket or two

How the options are calculated and what to keep in mind at the connection

Flight times come from the nonstop schedule (estimated from the distance where there is no schedule), with 3h allowed for the connection. The price of an option is the sum of the lowest known fares for each leg; their dates may not match, so treat it as a guide. The search shows tickets for your dates, including connections on a single ticket.

Nearest nonstop flights

The closest you can get without a connection

Frequently asked questions

Is there a nonstop flight from San Francisco to San Juan?
There are no nonstop flights in the schedule. You will need a connection, the fastest is via Austin.
What is the fastest way to fly from San Francisco to San Juan?
Via Austin: 3h 30m to the connection, 4h 30m after it, about 11h in total with 3h for the connection.
How much does a flight from San Francisco to San Juan with a connection cost?
Two nonstop tickets via Atlanta from $226. This is the sum of the lowest known prices for each leg, and their dates may not match.
Which cities can you connect in between San Francisco and San Juan?
Austin (11h total), Tampa (11h 4m total), Miami (11h 8m total), Atlanta (11h 10m total) and Dallas (11h 16m total).
How far is San Juan from San Francisco?
3,622 mi (5,829 km) in a straight line between the cities.
How much time should I allow for the connection?
The options allow 3h. On a single ticket the carrier is responsible for the connection; on separate tickets you set the margin yourself, allowing time to collect and re-check your bags.